Season
- Season 3 2010-07-05
- Season 2 2009-07-30
- Season 1 2008-06-05
- Season 0 2007-05-07
Episode
- Episode 1: Jar She Blows!
- Episode 2: Behind the Curtain
- Episode 3: SHUT iT
- Episode 4: Who's Moochin' Who?
- Episode 5: Over the Moon
- Episode 6: 100 Percensus
- Episode 7: Off With His Hat
- Episode 8: K'nuckles and His Hilarious Problem
- Episode 9: Fancy Pants
- Episode 10: Cuddle Trouble
- Episode 11: Who's That Man in the Mirror?
- Episode 12: Unhappy Endings
- Episode 13: S.S. K'nuckies
- Episode 14: Candy Casanova
- Episode 15: Down with the Ship
- Episode 16: Willy! (Or Won't He?)
- Episode 17: Bubbie's Tummy Ache
- Episode 18: Mind the Store, Don't Look in the Drawer
- Episode 19: Please Retire
- Episode 20: Under the Sea Monster
- Episode 21: Flapjack Goes To a Party
- Episode 22: Rye Ruv Roo
- Episode 23: Low Tidings
- Episode 24: Come Home Cap'n
- Episode 25: Fastest Man Alive
- Episode 26: Oh You Animal
- Episode 27: The Return of Sally Syrup
- Episode 28: Lazy Bones
- Episode 29: Two Old Men and a Lock Box
- Episode 30: Bam!
- Episode 31: Lost at Land
- Episode 32: Just One Kiss
- Episode 33: Wishing Not so Well
- Episode 34: N Is for Navy
- Episode 35: What's Eatin' Ya, Cap'm?
- Episode 36: I'm So Proud of Me
- Episode 37: A Day Without Laughter
- Episode 38: All Hands on Deck
The Marvelous Misadventures of Flapjack Season 2 Candy Casanova
A young boy who grew up inside a talking whale sets sail for magical Candied Island, accompanied by Capt. K'nuckles, a crusty old pirate.
